Index

A

adjust_dimensions() (in module cohere_core.utils)

B

binning() (in module cohere_core.utils)

C

center_max() (in module cohere_core.utils) cohere_core.config_verifier module cohere_core.phasing module cohere_core.reconstruction_coupled module cohere_core.reconstruction_GA module

cohere_core.reconstruction_multi module cohere_core.reconstruction_single module cohere_core.standard_preprocess module cohere_core.utils module crop_center() (in module cohere_core.utils)

E

estimate_no_proc() (in module cohere_core.utils)

G

get_avail_gpu_runs() (in module cohere_core.utils) get_central_object_extent() (in module cohere_core.utils) get_good_dim() (in module cohere_core.utils)

get_gpu_use() (in module cohere_core.utils) get_logger() (in module cohere_core.utils) get_one_dev() (in module cohere_core.utils) get_oversample_ratio() (in module cohere_core.utils)

M

module cohere_core.config_verifier cohere_core.phasing cohere_core.reconstruction_coupled cohere_core.reconstruction_GA cohere_core.reconstruction_multi cohere_core.reconstruction_single cohere_core.standard_preprocess cohere_core.utils

P

pad_center() (in module cohere_core.utils)

prep() (in module cohere_core.standard_preprocess)

R

read_config() (in module cohere_core.utils) read_results() (in module cohere_core.utils) read_tif() (in module cohere_core.utils) Rec (class in cohere_core.phasing) reconstruction() (in module cohere_core.phasing) (in module cohere_core.reconstruction_coupled) (in module cohere_core.reconstruction_GA) (in module cohere_core.reconstruction_multi) (in module cohere_core.reconstruction_single)

Resize() (in module cohere_core.utils)

S

save_metrics() (in module cohere_core.utils) save_results() (in module cohere_core.utils)

save_tif() (in module cohere_core.utils) select_central_object() (in module cohere_core.utils)

T

threshold_by_edge() (in module cohere_core.utils)

V

verify() (in module cohere_core.config_verifier)

W

write_config() (in module cohere_core.utils)

write_plot_errors() (in module cohere_core.utils)