======== config_mp ======== - scan: | Mandatory, string type encapsulating scans or ranges of scans containing data for each peak. The scans/scan ranges should be arranged in ascending order. | example: :: scan = "898-913,919-934,940-955,961-976" - orientations: | Mandatory, a list of lists, each inner list defining the orientation of a peak. | example: :: orientations = [[-1, -1, 1], [0, 0, 2], [1, 1, 1], [2, 0, 0]] - hkl_in: | Mandatory, list with Miller indices representing the in-plane lattice vector. | example: :: hkl_in = [3.031127677370978, 12.31353345906843, 8.75104158816168] - hkl_out: | Mandatory, list with Miller indices representing the out-of-plane lattice vector. | example: :: hkl_out = [9.77805918769193, -8.402719849515048, 8.436553021703112] - twin_plane: | Mandatory, list with Miller indices of the twin plane. If there is not a twin plane, this should be the same as sample_axis. | example: :: twin_plane = [1, -1, 1] - sample_axis: | Mandatory, axis of the sample. The data will be rotated so that the twin plane vector in the lattice frame (hkl) corresponds to this vector in the array frame (xyz). | example: :: sample_axis = [0, 1, 0] - final_size: | Mandatory, a size in each dimension of the array holding reconstructed object. | example: :: final_size = 180 - mp_max_weight: | Optional, a number between 0 and 1.0 specifying the initial coupling weight assigned to all peaks. if not provided, defaults to 1.0. | example: :: mp_max_weight = 1.0 - mp_taper: | Mandatory, fraction of the total iterations at which to begin tapering the coupling weight. Coupling weight will decrease for all peaks starting at mp_taper times the total number of iterations. | example: :: mp_taper = 0.6 - lattice_size: | Mandatory, lattice parameter of the reconstructing crystal. This is used to define the reciprocal lattice vectors, which are required for projecting to each peak. | example: :: lattice_size = 0.4078 - switch_peak_trigger: | Mandatory, a trigger defining at which iteration to switch the peak. | example: :: switch_peak_trigger = [0, 50]